Characterization of 16 microsatellite markers for the Oreinotinus clade of Viburnum (Adoxaceae).

نویسندگان

  • Syndi Barish
  • Mónica Arakaki
  • Erika J Edwards
  • Michael J Donoghue
  • Wendy L Clement
چکیده

PREMISE OF THE STUDY Microsatellite loci were isolated from four species of Viburnum (Adoxaceae) to study population structure and assess species boundaries among morphologically similar South American Viburnum species of the Oreinotinus clade. METHODS AND RESULTS Using a microsatellite-enriched library and mining next-generation sequence data, 16 microsatellites were developed. Each locus was tested on two populations of V. triphyllum and one population of V. pichinchense. For nuclear loci, one to 13 alleles were recovered, expected heterozygosity ranged from 0 to 0.8975, Simpson diversity index ranged from 0.0167 to 1.000, and Shannon diversity index ranged from 0 to 2.3670 in a given population. For the mitochondrial locus, three to six alleles were recovered and unbiased haploid diversity values ranged from 0.756 to 0.853 in a given population. CONCLUSIONS The 16 microsatellite loci developed for the Oreinotinus clade (Viburnum, Adoxaceae) will inform investigations of population structure and species boundaries within this group.

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Characterization of 16 microsatellite markers for the Oreinotinus clade of Viburnum (Adoxaceae)1

Applications in Plant Sciences Viburnum L. (Adoxaceae) is a clade of approximately 165 species of shrubs and small trees that occur in northern temperate forests, the mountains of Central and South America, and subtropical montane forests of Southeast Asia. The phylogeny of Viburnum provides a clear understanding of relationships among major clades (Spriggs et al., 2015). However, evolutionary ...

متن کامل

Viburnum Phylogeny Based on Chloroplast trnK Intron and Nuclear Ribosomal ITS DNA Sequences

Phylogenetic analyses of chloroplast trnK intron and nuclear ribosomal ITS DNA sequences yield signiŽcant improvements in our understanding of relationships, character evolution, and biogeography in Viburnum (Adoxaceae). We conŽrm that most of the ten traditionally recognized sections are monophyletic. The most striking exception is Odontotinus, which is divided into: (i) a purple-fruited New W...

متن کامل

Evolution of leaf form correlates with tropical-temperate transitions in Viburnum (Adoxaceae).

Strong latitudinal patterns in leaf form are well documented in floristic comparisons and palaeobotanical studies. However, there is little agreement about their functional significance; in fact, it is still unknown to what degree these patterns were generated by repeated evolutionary adaptation. We analysed leaf form in the woody angiosperm clade Viburnum (Adoxaceae) and document evolutionaril...

متن کامل

Phylogenetic and Experimental Tests of Interactions among Mutualistic Plant Defense Traits in <italic>Viburnum</italic> (Adoxaceae)

Plant traits that mediate mutualistic interactions are widespread, yet few studies have linked their macroevolutionary patterns with the ecological interactions they mediate. Here we merged phylogenetic and experimental approaches to investigate the evolution of two common mutualistic plant traits, extrafloral nectaries (EFNs) and leaf domatia. By using the flowering plant clade Viburnum, we te...

متن کامل

Phylogeny and Phylogenetic Taxonomy of Dipsacales, with Special Reference to Sinadoxa and Tetradoxa (adoxaceae)

To further clarify phylogenetic relationships within Dipsacales,we analyzed new and previously published rbcL sequences, alone and in combination with morphological data. We also examined relationships within Adoxaceae using rbcL and nuclear ribosomal internal transcribed spacer (ITS) sequences. We conclude from these analyses that Dipsacales comprise two major lineages:Adoxaceae and Caprifolia...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

عنوان ژورنال:
  • Applications in plant sciences

دوره 4 12  شماره 

صفحات  -

تاریخ انتشار 2016